|
grxC
|
| |
| Information
for grxC, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3781288-3781755
|
-
|
CDS
|
|
|
protein export; molecular chaperone; may bind to signel sequence
|
|
3781818-3782069
|
-
|
CDS
|
grxC
|
|
glutaredoxin 3
|
|
3782211-3782642
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for grxC:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.259
|
3782175-3782192 R
|
tttca TGATGCAGGCCGTTAGCT gcaat
|
-
|
0
|
IRU14 (18)
|
|
|
|
|
2.259
|
3782104-3782121 R
|
cattt TGCTGCCGCCCTGCAACA tgaaa
|
-
|
0
|
IRU14 (18)
|
|
|
|
|
1.883
|
3782130-3782153 R
|
cgact TATTGTTATAAGCTTCTGGGGACA ctcca
|
-
|
0
|
IRU14 (24)
|
|
|
|
|
0.788
|
3782070-3782086 R
|
gtaaa AAAACAGGAGCTAATTT atggc
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.66
|
|
p=0.05
|
5.31
|
|
p=0.1
|
4.59
|
|
p=0.2
|
3.95
|
|
|