gshA
 
Information for gshA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2812239-2812754
-
CDS
orf; hypothetical protein
2812905-2814461
-
CDS
gshA
gamma-glutamate-cysteine ligase
2814534-2814962
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for gshA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.552
2814462-2814482 R
acgat TTTGACAGGCGGGAGGTCAAT ttgat
-
0
-
2.476
2814492-2814508 R
tcacc ATTACAGTTATGCTAAT taaaa
-
0
-
2.289
2814475-2814496 R
ttatg CTAATTAAAACGATTTTGACAG gcggg
-
0
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

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