|
gsp
|
| |
| Information
for gsp, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3132887-3134386
|
-
|
CDS
|
|
|
low-affinity phosphate transport
|
|
3134678-3136537
|
-
|
CDS
|
gsp
|
|
glutathionylspermidine synthetase/amidase
|
|
3136694-3137608
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for gsp:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.694
|
3136641-3136664 R
|
taacc CTTTGCGCCAGCCGCTGCGATGAG gtgta
|
-
|
0
|
-
|
|
|
|
|
2.694
|
3136599-3136622 R
|
ctgac CTCTGTCCGGTTAATGTCGCTGAG caggt
|
-
|
0
|
-
|
|
|
|
|
0.000
|
3136665-3136688 R
|
ttgct GTACAGAATGTGAATTTTTTAACC ctttg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|