|
guaA
|
| |
| Information
for guaA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2628346-2628885
|
+
|
CDS
|
|
|
putative membrane protein
|
|
2628978-2630555
|
-
|
CDS
|
guaA
|
|
GMP synthetase (glutamine-hydrolyzing)
|
|
2630624-2632090
|
-
|
CDS
|
|
|
IMP dehydrogenase
|
|
| |
Reported regulatory
sites for guaA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.573
|
2630578-2630596 R
|
cgggc GATTTATATTATCTGTTTC acttg
|
-
|
0
|
-
|
|
|
|
|
1.920
|
2630595-2630618 R
|
ttctc TTCGCCCGACTTCATGTCGGGCGA tttat
|
-
|
0
|
-
|
|
|
|
|
1.805
|
2630559-2630582 R
|
tatct GTTTCACTTGCCTCGGAATAAGCG tcaat
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|