|
guaB
|
| |
| Information
for guaB, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2628978-2630555
|
-
|
CDS
|
|
|
GMP synthetase (glutamine-hydrolyzing)
|
|
2630624-2632090
|
-
|
CDS
|
guaB
|
|
IMP dehydrogenase
|
|
2632252-2633622
|
+
|
CDS
|
|
|
exonuclease VII; large subunit
|
|
| |
Reported regulatory
sites for guaB:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
2632139-2632164
|
|
purR
|
transcriptional repressor for pur regulon glyA glnB prsA speA
|
|
2631877-2631886
|
|
dnaA
|
DNA biosynthesis; initiation of chromosome replication; can be transcription regulator
|
|
2632234-2632256
|
|
crp
|
cyclic AMP receptor protein
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
7.691
|
2632121-2632138 R
|
tctgt ATAATGCCGCGGCAATAT ttatt
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.669
|
2632144-2632159 R
|
ggtag ATGCAATCGGTTACGC tctgt
|
purR
|
16
|
-
|
|
|
|
|
2.669
|
2632091-2632106 R
|
actct GGTCGAGATATTGCCC atgct
|
-
|
0
|
-
|
|
|
|
|
2.353
|
2632225-2632243 R
|
agcga GATCAAATTCTAAATCAGC aggtt
|
-
|
0
|
-
|
|
|
|
|
2.353
|
2632163-2632181 R
|
gcaag CATTTTTTGCAAAAAGGGG tagat
|
purR
|
2
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|