|
hcaA1
|
| |
| Information
for hcaA1, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2666026-2666916
|
-
|
CDS
|
|
|
transcriptional activator of hca cluster
|
|
2667052-2668413
|
+
|
CDS
|
hcaA1
|
|
large terminal subunit of phenylpropionate dioxygenase
|
|
2668410-2668928
|
+
|
CDS
|
|
|
small terminal subunit of phenylpropionate dioxygenase
|
|
| |
Reported regulatory
sites for hcaA1:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
0
|
|
-
|
-
|
-
|
-
|
-
|
-
|
-
|
|
| |
Critical
MAP values:
|
p=0.01
|
3.34
|
|
p=0.05
|
2.41
|
|
p=0.1
|
2.01
|
|
p=0.2
|
1.55
|
|
|