|
hemL
|
| |
| Information
for hemL, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
171462-173444
|
+
|
CDS
|
|
|
hydroxamate-dependent iron uptake; cytoplasmic membrane component
|
|
173602-174882
|
-
|
CDS
|
hemL
|
|
glutamate-1-semialdehyde aminotransferase (aminomutase)
|
|
175107-176528
|
+
|
CDS
|
|
|
putative channel transporter
|
|
| |
Reported regulatory
sites for hemL:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.836
|
175078-175094 R
|
tcact TATTGGTCATACAAATA agatg
|
-
|
0
|
-
|
|
|
|
|
2.802
|
175025-175045 R
|
catga AAATCCTTTGCAAAGCGTAAT gtttc
|
-
|
0
|
-
|
|
|
|
|
2.705
|
174908-174926 R
|
taaca TAGAATAGCAGCCATTCAC ttttt
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|