|
hflK
|
| |
| Information
for hflK, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4398250-4399530
|
+
|
CDS
|
|
|
GTP - binding subunit of protease specific for phage lambda cII repressor
|
|
4399616-4400875
|
+
|
CDS
|
hflK
|
|
protease specific for phage lambda cII repressor
|
|
4400878-4401882
|
+
|
CDS
|
|
|
protease specific for phage lambda cII repressor
|
|
| |
Reported regulatory
sites for hflK:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.861
|
4399590-4399606
|
gatca CCGCATAACAAATATGG agcac
|
-
|
0
|
-
|
|
|
|
|
1.597
|
4399562-4399585
|
atatc CTCTGGCGTCGAAAGACAACAGGG atcac
|
-
|
0
|
-
|
|
|
|
|
0.363
|
4399540-4399560
|
gtagc GTCTGAAGCGTGGAGTCATAT cctct
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|