hisG
 
Information for hisG, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2088018-2088068
+
CDS
his operon leader peptide
2088214-2089113
+
CDS
hisG
ATP phosphoribosyltransferase
2089119-2090423
+
CDS
L-histidinal:NAD+ oxidoreductase; L-histidinol:NAD+ oxidoreductase
 
Reported regulatory sites for hisG:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
2088051-2088162
Neidhardt (2nd edition) E.coli and Salmonella
stem-loop
attenuator
 
Species with an ortholog: HI SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.879
2088135-2088157
aaagc CCCCGGAAGATCACCTTCCGGGG gcttt
stem-loop
23
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.095
2088023-2088043
atgac ACGCGTTCAATTTAAACACCA ccatc
-
0
-
2.612
2088053-2088076
catca CCATCATCCTGACTAGTCTTTCAG gcgat
stem-loop
24
-
2.612
2088087-2088110
gtgtg CTGGAAGACATTCAGATCTTCCAG tggtg
stem-loop
24
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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