hlyE
 
Information for hlyE, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1228023-1228499
+
CDS
orf; hypothetical protein
1228706-1229623
-
CDS
hlyE
hemolysin E
1229990-1230409
+
CDS
SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC
 
Reported regulatory sites for hlyE:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
1229740-1229761
fnr
transcriptional regulation of aerobic anaerobic respiration osmotic balance
 
Species with an ortholog: ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
5.086
1229631-1229650 R
tttca TTACAATTTATATATTTAAA gaggc
-
0
-
0.676
1229664-1229685 R
tgaag TAAAATTTATTAATAGTTGTAA aacag
-
0
-
0.384
1229953-1229968 R
ttata CTGTTTTTATATACAG tagtc
lexA
16
-
0.384
1229923-1229938 R
cttgc CAGCAGATCAATACTG attca
-
0
-
 
Critical MAP values:
p=0.01
7.59
p=0.05
6.45
p=0.1
5.76
p=0.2
5.04

Click here to go back