holC

Information for holC, and also upstream and downstream flanking genes:

Genome coordinates Orientation Gene type Name EcoGene Annotation 4478550-4481405 - CDS valS EG11067 valine tRNA synthetase 4481405-4481848 - CDS holC EG11413 DNA polymerase III; chi subunit 4482008-4483519 - CDS pepA EG10694 aminopeptidase A/I

Reported regulatory sites for holC: Genome coordinates Source Transcription factor Transcription factor annotation

Species with an ortholog: HI SP ST EC VC YP

Predictions with an average map value >= the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment

Predictions with an average map value < the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment 2.211 4481919-4481934 R ctcgt AGGCCTGATAAGACAC aacag - 0 REP342a (16) 2.211 4481866-4481881 R ctgat GCGTATTTAAATCCAC cacaa - 0 - 2.126 4481849-4481864 R ccacc ACAAGAAGCCCCATTT atgaa - 0 - 1.837 4481889-4481907 R gtcgc ATCAGGCGCTGCGGTGTAT acctg - 0 REP342a (7)

Critical MAP values: p=0.01 5.41 p=0.05 4.01 p=0.1 3.43 p=0.2 2.86

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