hpt
 
Information for hpt, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
138835-141225
-
CDS
glucose dehydrogenase
141419-141967
+
CDS
hpt
hypoxanthine phosphoribosyltransferase
142008-142670
-
CDS
putative carbonic anhdrase (EC 4.2.1.1)
 
Reported regulatory sites for hpt:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.729
141307-141326
aattc GAGCTTTATTAACAGATTCC gcgaa
-
0
-
2.729
141399-141418
gcgaa GTGATTTGTTTTTAAATCAT atggt
-
0
-
1.242
141237-141254
acacc ATTTCAATTCATTAATAT tttag
-
0
-
1.242
141278-141295
taggt TTTAACATGTGTGATCGT catca
-
0
-
1.230
141296-141312
atcgt CATCACAATTCGAGCTT tatta
-
0
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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