|
hpt
|
| |
| Information
for hpt, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
138835-141225
|
-
|
CDS
|
|
|
glucose dehydrogenase
|
|
141419-141967
|
+
|
CDS
|
hpt
|
|
hypoxanthine phosphoribosyltransferase
|
|
142008-142670
|
-
|
CDS
|
|
|
putative carbonic anhdrase (EC 4.2.1.1)
|
|
| |
Reported regulatory
sites for hpt:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.729
|
141307-141326
|
aattc GAGCTTTATTAACAGATTCC gcgaa
|
-
|
0
|
-
|
|
|
|
|
2.729
|
141399-141418
|
gcgaa GTGATTTGTTTTTAAATCAT atggt
|
-
|
0
|
-
|
|
|
|
|
1.242
|
141237-141254
|
acacc ATTTCAATTCATTAATAT tttag
|
-
|
0
|
-
|
|
|
|
|
1.242
|
141278-141295
|
taggt TTTAACATGTGTGATCGT catca
|
-
|
0
|
-
|
|
|
|
|
1.230
|
141296-141312
|
atcgt CATCACAATTCGAGCTT tatta
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|