hsdR
 
Information for hsdR, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4579029-4580618
-
CDS
host modification; DNA methylase M
4580819-4584385
-
CDS
hsdR
host restriction; endonuclease R
4584519-4585433
+
CDS
restriction of methylated adenine
 
Reported regulatory sites for hsdR:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: SP ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
0.039
4584480-4584503 R
tgcag AATCAGGTAGATGTTTTTCGGCTA ctata
-
0
-
 
Critical MAP values:
p=0.01
6.82
p=0.05
5.66
p=0.1
5.03
p=0.2
4.36

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