htpX
 
Information for htpX, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1908189-1909673
+
CDS
putative transport protein
1909719-1910600
-
CDS
htpX
heat shock protein; integral membrane protein
1910792-1912840
-
CDS
carboxy-terminal protease for penicillin-binding protein 3
 
Reported regulatory sites for htpX:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.150
1910605-1910628 R
tgcgt TTTGTTAAACTGAGGTAAAAAGAA aatta
-
0
-
2.427
1910758-1910776 R
gcaca AGAAATTGTGCCTGATTTT ttaac
-
0
-
2.427
1910706-1910724 R
atgct ACAAAATGTAAAGTTGTGT ctttc
-
0
-
2.249
1910642-1910660 R
cgcgt AACCCATACGATGTGGGTA tcgca
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

Click here to go back