hycB

Information for hycB, and also upstream and downstream flanking genes:

Genome coordinates Orientation Gene type Name EcoGene Annotation 2845438-2847264 - CDS hycC EG10476 membrane-spanning protein of hydrogenase 3 (part of FHL complex) 2847261-2847872 - CDS hycB EG10475 probable small subunit of hydrogenase-3; iron-sulfur protein (part of formate hydrogenlyase (FHL) complex) 2847997-2848458 - CDS hycA EG10474 transcriptional repression of hyc and hyp operons

Reported regulatory sites for hycB: Genome coordinates Source Transcription factor Transcription factor annotation 2847892-2847948 PMID: 8034727 fhlA formate hydrogen-lyase transcriptional activator for fdhF hyc and hyp operons

Species with an ortholog: ST EC

Predictions with an average map value >= the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment

Predictions with an average map value < the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment 5.302 2847921-2847938 R cgatg AGTGTCGAAAATGACATT tcatc fhlA 18 - 5.302 2847890-2847907 R atgtt TTCGTCAAAAATGACAAT cacct fhlA 16 - 2.092 2847941-2847958 R ctgtt TGGGGATGGGCGTGTCGA tgagt fhlA 8 - 1.816 2847960-2847976 R gtttt GCAGGCGTTACGCCTGT ttggg - 0 - -

Critical MAP values: p=0.01 7.59 p=0.05 6.45 p=0.1 5.76 p=0.2 5.04

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