ibpA
 
Information for ibpA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3864096-3864530
-
CDS
heat shock protein
3864636-3865049
-
CDS
ibpA
heat shock protein
3865280-3865687
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for ibpA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.724
3865085-3865101 R
ctgac CTGTCCATTGTGGAAGG tctta
-
0
-
2.996
3865212-3865228 R
ccctc AGTCTATGCAATAGACC ataaa
-
0
-
2.438
3865113-3865135 R
cgatg AGGACGCGCCTGATGGGTGTTCT ggcta
-
0
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

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