|
ibpA
|
| |
| Information
for ibpA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3864096-3864530
|
-
|
CDS
|
|
|
heat shock protein
|
|
3864636-3865049
|
-
|
CDS
|
ibpA
|
|
heat shock protein
|
|
3865280-3865687
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for ibpA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.724
|
3865085-3865101 R
|
ctgac CTGTCCATTGTGGAAGG tctta
|
-
|
0
|
-
|
|
|
|
|
2.996
|
3865212-3865228 R
|
ccctc AGTCTATGCAATAGACC ataaa
|
-
|
0
|
-
|
|
|
|
|
2.438
|
3865113-3865135 R
|
cgatg AGGACGCGCCTGATGGGTGTTCT ggcta
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|