iclR

Information for iclR, and also upstream and downstream flanking genes:

Genome coordinates Orientation Gene type Name EcoGene Annotation 4217880-4220066 - CDS arp EG11208 regulator of acetyl CoA synthetase 4220383-4221246 - CDS iclR EG10491 repressor of aceBA operon 4221407-4225090 + CDS metH EG10587 B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase; repressor of metE and metF

Reported regulatory sites for iclR: Genome coordinates Source Transcription factor Transcription factor annotation 4221277-4221293 DPInteract fadR negative regulator for fad regulon and positive activator of fabA 4221231-4221245 DPInteract iclR repressor of aceBA operon

Species with an ortholog: ST EC YP

Predictions with an average map value >= the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment

Predictions with an average map value < the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment 5.801 4221277-4221293 R acatt AACTCATCGGATCAGTT cagta fadR 17 - 2.590 4221300-4221316 R ccacg CAACATGAGATTTGTTC aacat metR 13 - 1.416 4221364-4221379 R ccaga TTTAATAAAAATTCAA caaac - 0 -

Critical MAP values: p=0.01 7.30 p=0.05 6.05 p=0.1 5.26 p=0.2 4.60

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