idnR
 
Information for idnR, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4486129-4487631
-
CDS
orf; hypothetical protein
4487709-4488707
-
CDS
idnR
L-idonate transcriptional regulator
4488774-4490093
-
CDS
L-idonate transporter
 
Reported regulatory sites for idnR:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
0.352
4488746-4488768 R
aagaa TAAAATATTGTGATGTAGTTTCG gggga
-
0
-
0.000
4488727-4488743 R
tcggg GGAAGATTGAAGATTCC cccga
-
0
-
-
 
Critical MAP values:
p=0.01
6.66
p=0.05
5.31
p=0.1
4.59
p=0.2
3.95

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