|
ilvD
|
| |
| Information
for ilvD, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3950107-3951036
|
+
|
CDS
|
|
|
branched-chain amino-acid aminotransferase
|
|
3951132-3952949
|
+
|
CDS
|
ilvD
|
|
dihydroxyacid dehydratase
|
|
3952952-3954496
|
+
|
CDS
|
|
|
threonine deaminase (dehydratase)
|
|
| |
Reported regulatory
sites for ilvD:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.802
|
3951102-3951125
|
aagta TGCCTAAGTACCGTTCCGCCACCA ccact
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
0.290
|
3951066-3951087
|
ccgtc CCATTTACGAGACAGACACTGG gagta
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|