|
imp
|
| |
| Information
for imp, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
53416-54702
|
-
|
CDS
|
|
|
survival protein
|
|
54755-57109
|
-
|
CDS
|
imp
|
|
organic solvent tolerance
|
|
57364-58179
|
+
|
CDS
|
|
|
putative DNA binding protein
|
|
| |
Reported regulatory
sites for imp:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.658
|
57240-57262 R
|
ctata ATTTGCATTATCATACCTGTCAT tcaat
|
-
|
0
|
-
|
|
|
|
|
3.390
|
57320-57337 R
|
ggata TCAGGGCTATCTCCCACA atata
|
-
|
0
|
-
|
|
|
|
|
3.390
|
57263-57280 R
|
tcaat TGTGGGACATCGCCTATA atttg
|
-
|
0
|
-
|
|
|
|
|
1.862
|
57179-57202 R
|
cggac AGGATTAACACTAGCGTAGAGATG acgag
|
-
|
0
|
-
|
|
|
|
|
1.862
|
57126-57149 R
|
ttgtc ACGCGCAACGTTACCGATGATGGA acaat
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|