infA
 
Information for infA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
925107-925194
-
tRNA
Serine tRNA5
925448-925666
-
CDS
infA
protein chain initiation factor IF-1
925951-926655
-
CDS
leucyl; phenylalanyl-tRNA-protein transferase
 
Reported regulatory sites for infA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.545
925700-925719 R
agaac TTCGGCATTATCTTGCCGGT tcaaa
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.351
925668-925685 R
ggtag TGATACCCCAGAGGATTA gatgg
-
0
-
1.231
925819-925840 R
catcg TTTATCTCACCGCTCCCTTATA cgttg
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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