ispB
 
Information for ispB, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3330781-3331092
-
CDS
50S ribosomal subunit protein L21
3331351-3332322
+
CDS
ispB
octaprenyl diphosphate synthase
3332550-3332828
+
CDS
regulatory factor of maltose metabolism; similar to Ner repressor protein of phage Mu
 
Reported regulatory sites for ispB:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
5.507
3331137-3331159
gagtg CGCTATAAATATTCACAATAGGG cgcga
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.880
3331228-3331244
acaca ACTTGTACGGTAACGTT tatct
-
0
-
2.880
3331255-3331271
gtgcc ATTTTTTCAGTACAATC accct
-
0
-
2.295
3331093-3331109
tacat ATAAAACTCCGCTTCCG cgcac
-
0
-
2.295
3331332-3331348
ggggc GAAAAGCCCGGCTTTTG cgatg
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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