kgtP
 
Information for kgtP, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2722199-2722471
+
CDS
orf; hypothetical protein
2722468-2723766
-
CDS
kgtP
alpha-ketoglutarate permease
2724089-2724208
-
rRNA
5S rRNA of rrnG operon
 
Reported regulatory sites for kgtP:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST PA EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.194
2723849-2723868 R
ttaag GTTGCATAATGATATGCAAC aaatg
-
0
-
-
2.300
2724054-2724075 R
gcgaa AGGCCATCCTGACGGATGGCCT ttttg
-
0
-
0.365
2723870-2723889 R
tcctg CTAACTAAATTCATGGTTAA ggttg
-
0
-
 
Critical MAP values:
p=0.01
6.82
p=0.05
5.66
p=0.1
5.03
p=0.2
4.36

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