|
leuS
|
| |
| Information
for leuS, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
670828-671409
|
-
|
CDS
|
|
|
a minor lipoprotein
|
|
671424-674006
|
-
|
CDS
|
leuS
|
|
leucine tRNA synthetase
|
|
674241-674723
|
+
|
CDS
|
|
|
putative alpha helical protein
|
|
| |
Reported regulatory
sites for leuS:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.265
|
674063-674085 R
|
acgtt TGGGCTATGCTATGCGGATCTGA aaaac
|
-
|
0
|
-
|
|
|
|
|
3.043
|
674032-674051 R
|
acctc AACGCTACATTTGTAGCCGT attga
|
-
|
0
|
-
|
|
|
|
|
0.742
|
674010-674026 R
|
attga AAACAGGACCACTGGCT gccat
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|