lig
 
Information for lig, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2524966-2525964
+
CDS
putative cytochrome oxidase
2526181-2528196
-
CDS
lig
DNA ligase
2528267-2529253
-
CDS
cell division protein involved in FtsZ ring
 
Reported regulatory sites for lig:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
9.786
2528217-2528237 R
cttcg AACCCCCGCTTGTCGGGGGTT tttag
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.462
2528200-2528215 R
ggttt TTAGCATTGATGGTGC gatat
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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