|
lldP
|
| |
| Information
for lldP, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3774292-3774654
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
3775026-3776681
|
+
|
CDS
|
lldP
|
|
L-lactate permease
|
|
3776681-3777457
|
+
|
CDS
|
|
|
transcriptional regulator
|
|
| |
Reported regulatory
sites for lldP:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
3774893-3774907
|
|
arcA
|
negative response regulator of genes in aerobic pathways (sensors ArcB and CpxA)
|
|
| |
| Species with
an ortholog: PA SP ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
6.810
|
3774811-3774827
|
acaag AATTGGCCCTACCAATT cttcg
|
-
|
0
|
-
|
|
|
|
|
6.810
|
3774937-3774953
|
aacac AATTGGCAGTGCCACTT ttaca
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.307
|
3774888-3774910
|
tgcca ATACATAACATTTAGTTAACCAT tcatt
|
arcA
|
15
|
-
|
|
|
|
|
1.998
|
3774914-3774933
|
attca TTGTCATTATCCCTACACAA cacaa
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.09
|
|
p=0.05
|
4.94
|
|
p=0.1
|
4.37
|
|
p=0.2
|
3.74
|
|
|