|
lolA
|
| |
| Information
for lolA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
932447-936436
|
+
|
CDS
|
|
|
cell division protein
|
|
936592-937206
|
+
|
CDS
|
lolA
|
|
periplasmic protein effects translocation of lipoproteins from inner membrane to outer
|
|
937217-938560
|
+
|
CDS
|
|
|
putative polynucleotide enzyme
|
|
| |
Reported regulatory
sites for lolA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
5.595
|
936495-936511
|
caact GAAAATTCAGTATTTTC ttctt
|
-
|
0
|
-
|
|
|
|
|
4.344
|
936521-936539
|
ttcct CAAGCTGATTATTAGCCTG gaata
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.794
|
936558-936573
|
aggga ACTCCCGATCGGGAGT gacgt
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|