lysP
 
Information for lysP, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2242798-2244789
-
CDS
outer membrane receptor for iron-regulated colicin I receptor; porin; requires tonB gene product
2245083-2246552
-
CDS
lysP
lysine-specific permease
2246757-2247638
-
CDS
putative transcriptional regulator LYSR-type
 
Reported regulatory sites for lysP:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
5.689
2246571-2246593 R
gtctg CTACAATCGCGCCTCATTTTTAA gatgg
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.164
2246594-2246615 R
tctgc CGGAAGGATTGCCAATCGTCTG ctaca
-
0
-
1.824
2246607-2246623 R
cgtgt ATTTCTGCCGGAAGGAT tgcca
-
0
-
 
Critical MAP values:
p=0.01
6.66
p=0.05
5.31
p=0.1
4.59
p=0.2
3.95

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