|
malE
|
| |
| Information
for malE, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4241110-4242654
|
-
|
CDS
|
|
|
part of maltose permease; periplasmic
|
|
4242808-4243998
|
-
|
CDS
|
malE
|
|
periplasmic maltose-binding protein; substrate recognition for transport and chemotaxis
|
|
4244363-4245478
|
+
|
CDS
|
|
|
ATP-binding component of transport system for maltose
|
|
| |
Reported regulatory
sites for malE:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
4244109-4244130
|
|
crp
|
cyclic AMP receptor protein
|
|
4244138-4244159
|
|
crp
|
cyclic AMP receptor protein
|
|
4244172-4244193
|
|
crp
|
cyclic AMP receptor protein
|
|
4244233-4244242
|
|
malT
|
positive regulator of mal regulon
|
|
4244246-4244255
|
|
malT
|
positive regulator of mal regulon
|
|
4244270-4244279
|
|
malT
|
positive regulator of mal regulon
|
|
4244077-4244086
|
|
malT
|
positive regulator of mal regulon
|
|
4244090-4244099
|
|
malT
|
positive regulator of mal regulon
|
|
| |
| Species with
an ortholog: ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.228
|
4244171-4244194 R
|
aagga ATTTCGTGATGTTGCTTGCAAAAA tcgtg
|
crp
|
22
|
-
|
|
|
|
|
4.228
|
4244108-4244131 R
|
cgcca ATTCTGTAACAGAGATCACACAAA gcgac
|
crp
|
22
|
-
|
|
|
|
|
3.578
|
4244326-4244342 R
|
taaca ACCTGTCATCGACAGCA acatt
|
-
|
0
|
-
|
|
|
|
|
2.873
|
4244137-4244160 R
|
gcgat TTTATGTGCGCATCTCCACATTAC cgcca
|
crp
|
22
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.66
|
|
p=0.05
|
5.31
|
|
p=0.1
|
4.59
|
|
p=0.2
|
3.95
|
|
|