|
malK
|
| |
| Information
for malK, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4242808-4243998
|
-
|
CDS
|
|
|
periplasmic maltose-binding protein; substrate recognition for transport and chemotaxis
|
|
4244363-4245478
|
+
|
CDS
|
malK
|
|
ATP-binding component of transport system for maltose
|
|
4245550-4246890
|
+
|
CDS
|
|
|
phage lambda receptor protein; maltose high-affinity receptor
|
|
| |
Reported regulatory
sites for malK:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
4244109-4244130
|
|
crp
|
cyclic AMP receptor protein
|
|
4244138-4244159
|
|
crp
|
cyclic AMP receptor protein
|
|
4244172-4244193
|
|
crp
|
cyclic AMP receptor protein
|
|
4244233-4244242
|
|
malT
|
positive regulator of mal regulon
|
|
4244246-4244255
|
|
malT
|
positive regulator of mal regulon
|
|
4244270-4244279
|
|
malT
|
positive regulator of mal regulon
|
|
4244077-4244086
|
|
malT
|
positive regulator of mal regulon
|
|
4244090-4244099
|
|
malT
|
positive regulator of mal regulon
|
|
| |
| Species with
an ortholog: PA ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.318
|
4244108-4244131
|
gtcgc TTTGTGTGATCTCTGTTACAGAAT tggcg
|
crp
|
22
|
-
|
|
|
|
|
4.318
|
4244171-4244194
|
cacga TTTTTGCAAGCAACATCACGAAAT tcctt
|
crp
|
22
|
-
|
|
|
|
|
3.359
|
4244313-4244331
|
tcagc CCATCATGAATGTTGCTGT cgatg
|
-
|
0
|
-
|
|
|
|
|
1.425
|
4244052-4244069
|
ctcta GTTTCTTTATACGGCAAC ctctt
|
-
|
0
|
-
|
|
|
|
|
1.425
|
4244210-4244227
|
acctc GGTTTAGTTCACAGAAGC cgtgt
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|