manA
 
Information for manA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1684755-1686401
-
CDS
fumarase A = fumarate hydratase Class I; aerobic isozyme
1686600-1687775
+
CDS
manA
mannose-6-phosphate isomerase
1687876-1689384
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for manA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
6.511
1686484-1686507
tccta CACACTTTTTTAACAAAAACTGAG actag
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.710
1686452-1686473
ttccg TTGCCCTGTTAAAAGCGAGTAA caata
-
0
-
1.710
1686574-1686595
attaa TTTCCACATTAAAACAGGGATT gatca
-
0
-
1.337
1686418-1686441
ttact GCCTGGTTTGGTTATGCTCTGGGC gggtg
-
0
-
 
Critical MAP values:
p=0.01
6.66
p=0.05
5.31
p=0.1
4.59
p=0.2
3.95

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