|
manY
|
| |
| Information
for manY, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1900072-1901043
|
+
|
CDS
|
|
|
PTS enzyme IIAB; mannose-specific
|
|
1901106-1901906
|
+
|
CDS
|
manY
|
|
PTS enzyme IIC; mannose-specific
|
|
1901910-1902770
|
+
|
CDS
|
|
|
PTS enzyme IID; mannose-specific
|
|
| |
Reported regulatory
sites for manY:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.774
|
1901063-1901081
|
tatca CTCAGTTTTCACACTTAAG tctta
|
-
|
0
|
-
|
|
|
|
|
0.757
|
1901087-1901105
|
tctta CGTAAACAGGAGAAGTACA atgga
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.30
|
|
p=0.05
|
6.05
|
|
p=0.1
|
5.26
|
|
p=0.2
|
4.60
|
|
|