|
map
|
| |
| Information
for map, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
185978-188650
|
-
|
CDS
|
|
|
protein PII; uridylyltransferase acts on regulator of glnA
|
|
188712-189506
|
-
|
CDS
|
map
|
|
methionine aminopeptidase
|
|
189874-190599
|
+
|
CDS
|
|
|
30S ribosomal subunit protein S2
|
|
| |
Reported regulatory
sites for map:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.237
|
189788-189809 R
|
ccaaa GGGCACCCCGGAATATGTGCCG atacg
|
-
|
0
|
-
|
|
|
|
|
4.064
|
189835-189851 R
|
aaaag TTGGGGTTATGCCTCCA cgtat
|
-
|
0
|
-
|
|
|
|
|
3.614
|
189690-189708 R
|
cggcg CGCTTTATACCACAAATAC gtcgt
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|