mdoG
 
Information for mdoG, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1107007-1108164
-
CDS
orf; hypothetical protein
1108558-1110093
+
CDS
mdoG
periplasmic glucans biosynthesis protein
1110086-1112629
+
CDS
membrane glycosyltransferase; synthesis of membrane-derived oligosaccharide (MDO)
 
Reported regulatory sites for mdoG:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
6.952
1108490-1108508
catta AAATAGATCGGATCGATAT aagca
-
0
-
5.901
1108481-1108498
ctggt TATCCATTAAAATAGATC ggatc
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
5.267
1108509-1108532
gatat AAGCACACAAAGGGGGAAGTGCTT actaa
-
0
-
 
Critical MAP values:
p=0.01
6.82
p=0.05
5.66
p=0.1
5.03
p=0.2
4.36

Click here to go back