melA
 
Information for melA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4338298-4339206
-
CDS
regulator of melibiose operon
4339489-4340844
+
CDS
melA
alpha-galactosidase
4340959-4342368
+
CDS
melibiose permease II
 
Reported regulatory sites for melA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
4339374-4339393
crp
cyclic AMP receptor protein
4339356-4339373
melR
regulator of melibiose operon
4339394-4339411
melR
regulator of melibiose operon
4339414-4339431
melR
regulator of melibiose operon
4339336-4339353
melR
regulator of melibiose operon
 
Species with an ortholog: ST EC VC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.181
4339397-4339416
ggatc TGAGTTTATGGGAATGCTCA acctg
melR
18
-
2.739
4339221-4339241
tcttt CCTGGAATATCAGAATTATGG cagga
melR
15
-
2.739
4339359-4339379
ttatt CCCATAAACTCAGATTTACTG ctgct
melR
crp
15
6
-
2.446
4339328-4339349
atgag GCCGAAAACTCTGCTTTTCAGG taatt
melR
14
-
2.446
4339419-4339440
tcaac CTGGAAGCCGGAGGTTTTCTGC agatt
melR
13
-
 
Critical MAP values:
p=0.01
6.82
p=0.05
5.66
p=0.1
5.03
p=0.2
4.36

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