menA
 
Information for menA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4116425-4116910
-
CDS
menaquinone biosynthesis; unknown
4117003-4117929
-
CDS
menA
1;4-dihydroxy-2-naphthoate --> dimethylmenaquinone
4117996-4119327
-
CDS
heat shock protein hslVU; ATPase subunit; homologous to chaperones
 
Reported regulatory sites for menA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.988
4117947-4117966 R
gtttg ATGGGGCTGAAAGGCCCCAT tttta
-
0
-
2.084
4117933-4117955 R
ctgaa AGGCCCCATTTTTATTGGCGCGT attat
-
0
-
0.907
4117972-4117987 R
cgttc AATCATTTTCATCATT gtttg
-
0
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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