|
menA
|
| |
| Information
for menA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4116425-4116910
|
-
|
CDS
|
|
|
menaquinone biosynthesis; unknown
|
|
4117003-4117929
|
-
|
CDS
|
menA
|
|
1;4-dihydroxy-2-naphthoate --> dimethylmenaquinone
|
|
4117996-4119327
|
-
|
CDS
|
|
|
heat shock protein hslVU; ATPase subunit; homologous to chaperones
|
|
| |
Reported regulatory
sites for menA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.988
|
4117947-4117966 R
|
gtttg ATGGGGCTGAAAGGCCCCAT tttta
|
-
|
0
|
-
|
|
|
|
|
2.084
|
4117933-4117955 R
|
ctgaa AGGCCCCATTTTTATTGGCGCGT attat
|
-
|
0
|
-
|
|
|
|
|
0.907
|
4117972-4117987 R
|
cgttc AATCATTTTCATCATT gtttg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|