metJ

Information for metJ, and also upstream and downstream flanking genes:

Genome coordinates Orientation Gene type Name EcoGene Annotation 4124866-4125474 - CDS yiiX EG11882 orf; hypothetical protein 4125658-4125975 - CDS metJ EG10588 repressor of all met genes but metF 4126252-4127412 + CDS metB EG10582 cystathionine gamma-synthase

Reported regulatory sites for metJ: Genome coordinates Source Transcription factor Transcription factor annotation 4126181-4126188 DPInteract metJ repressor of all met genes but metF 4126173-4126180 DPInteract metJ repressor of all met genes but metF 4126165-4126172 DPInteract metJ repressor of all met genes but metF 4126157-4126164 DPInteract metJ repressor of all met genes but metF 4126149-4126156 DPInteract metJ repressor of all met genes but metF

Species with an ortholog: HI SP ST EC VC YP

Predictions with an average map value >= the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment 5.746 4126173-4126188 R ttaat GGACGTCAATACATCT ggaca metJ 16 - 5.746 4126157-4126172 R catct GGACATCTAAACTTCT ttgcg metJ 16 - 4.213 4126138-4126156 R cttct TTGCGTATAGATTGAGCAA atccc metJ 8 -

Predictions with an average map value < the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment 3.345 4126115-4126132 R atccc AAATAGCCGTTAAAATTA tatgc - 0 -

Critical MAP values: p=0.01 5.41 p=0.05 4.01 p=0.1 3.43 p=0.2 2.86

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