mfd
 
Information for mfd, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1168635-1169597
-
CDS
orf; hypothetical protein
1169741-1173187
-
CDS
mfd
transcription-repair coupling factor; mutation frequency decline
1173315-1174388
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for mfd:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
0.968
1173241-1173259 R
gataa TGAACAGCATTGCTTATCA gagat
-
0
-
0.939
1173270-1173291 R
gcgat TCAATTTGCTAAACCATGTCGA ttacg
-
0
-
0.629
1173292-1173311 R
aagcc ATCGCCCCAGCCGGGGCGAT tcaat
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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