|
mglB
|
| |
| Information
for mglB, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2235789-2237309
|
-
|
CDS
|
|
|
ATP-binding component of methyl-galactoside transport and galactose taxis
|
|
2237370-2238368
|
-
|
CDS
|
mglB
|
|
galactose-binding transport protein; receptor for galactose taxis
|
|
2238648-2239688
|
-
|
CDS
|
|
|
mgl repressor; galactose operon inducer
|
|
| |
Reported regulatory
sites for mglB:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
2238638-2238653
|
|
galR
|
repressor of galETK operon
|
|
| |
| Species with
an ortholog: HI ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.694
|
2238616-2238639 R
|
ctttc AATCTGTGAGTGATTTCACAGTAT cttaa
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.334
|
2238446-2238465 R
|
ttaaa AAGTGAGCTTCGGCGTTCAG taaca
|
-
|
0
|
-
|
|
|
|
|
1.988
|
2238541-2238564 R
|
cgtat GTAACAGTGAATAATCACTTTTGC cgagg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|