mgsA
 
Information for mgsA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1023694-1025748
+
CDS
DNA helicase IV
1025780-1026247
-
CDS
mgsA
methylglyoxal synthase
1026334-1026996
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for mgsA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.262
1026263-1026278 R
agtgc TTACAGTAATCTGTAG gaaag
-
0
-
1.411
1026282-1026301 R
tcggt CTTTATCTTGCAGCGATAAG tgctt
-
0
-
0.319
1026309-1026332 R
ctgag ATTTTTGTGCCTGTGCGCAGGCTT tttcg
-
0
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

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