|
mgtA
|
| |
| Information
for mgtA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4463873-4464820
|
-
|
CDS
|
|
|
repressor of treA;B;C
|
|
4465199-4467895
|
+
|
CDS
|
mgtA
|
|
Mg2+ transport ATPase; P-type 1
|
|
4468101-4468526
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for mgtA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.011
|
4465133-4465155
|
acctt CAGGTAAGGCTTCGCCACGCCTG aagac
|
-
|
0
|
-
|
|
|
|
|
3.984
|
4465094-4465115
|
taagg CCGTGACGTTTTAACGTCCCTG ctcag
|
-
|
0
|
-
|
|
|
|
|
3.875
|
4465025-4465040
|
acgcc TCTCCCTCGACGGAGA ttaaa
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.82
|
|
p=0.05
|
5.66
|
|
p=0.1
|
5.03
|
|
p=0.2
|
4.36
|
|
|