mgtA
 
Information for mgtA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4463873-4464820
-
CDS
repressor of treA;B;C
4465199-4467895
+
CDS
mgtA
Mg2+ transport ATPase; P-type 1
4468101-4468526
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for mgtA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.011
4465133-4465155
acctt CAGGTAAGGCTTCGCCACGCCTG aagac
-
0
-
3.984
4465094-4465115
taagg CCGTGACGTTTTAACGTCCCTG ctcag
-
0
-
3.875
4465025-4465040
acgcc TCTCCCTCGACGGAGA ttaaa
-
0
-
 
Critical MAP values:
p=0.01
6.82
p=0.05
5.66
p=0.1
5.03
p=0.2
4.36

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