|
mioC
|
| |
| Information
for mioC, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3921372-3923261
|
-
|
CDS
|
|
|
glucose-inhibited division; chromosome replication?
|
|
3923640-3924083
|
-
|
CDS
|
mioC
|
|
initiation of chromosome replication
|
|
3924173-3924631
|
-
|
CDS
|
|
|
regulator for asnA; asnC and gidA
|
|
| |
Reported regulatory
sites for mioC:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.418
|
3924125-3924147 R
|
ctttt CCACAGGTAGATCCCAACGCGTT cacag
|
-
|
0
|
-
|
|
|
|
|
2.341
|
3924154-3924173 R
|
ccctg ATCGGCTTTTTTAATCCCAT acttt
|
-
|
0
|
-
|
|
|
|
|
1.496
|
3924090-3924108 R
|
atacg CCACTCTTAATAAAGGTGG cggtt
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|