|
mreC
|
| |
| Information
for mreC, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3396024-3396512
|
-
|
CDS
|
|
|
rod shape-determining protein
|
|
3396512-3397615
|
-
|
CDS
|
mreC
|
|
rod shape-determining protein
|
|
3397681-3398784
|
-
|
CDS
|
|
|
regulator of ftsI; penicillin binding protein 3; septation function
|
|
| |
Reported regulatory
sites for mreC:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.941
|
3397646-3397669 R
|
gcagg CAGGGGAAGTGTCTGTTTACCCTG cctgg
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.935
|
3397616-3397631 R
|
atacg AGAATACGCATAACTT atgaa
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|