|
mrp
|
| |
| Information
for mrp, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2190535-2190816
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
2191079-2192218
|
-
|
CDS
|
mrp
|
|
putative ATPase
|
|
2192320-2194353
|
+
|
CDS
|
|
|
methionine tRNA synthetase
|
|
| |
Reported regulatory
sites for mrp:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA SP ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.789
|
2192304-2192319 R
|
gtcat AGTAGGCATTACTTCT taata
|
-
|
0
|
-
|
|
|
|
|
1.789
|
2192247-2192262 R
|
aaatg TTAAGTAAGTACTTCT ctata
|
-
|
0
|
-
|
|
|
|
|
1.629
|
2192272-2192293 R
|
gtgaa AAGGGGTTAGATAGTACCAAAT gggaa
|
-
|
0
|
-
|
|
|
|
|
0.424
|
2192227-2192245 R
|
ttctc TATATTCTTCAGGTAAACT atcag
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|