mrp
 
Information for mrp, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2190535-2190816
-
CDS
orf; hypothetical protein
2191079-2192218
-
CDS
mrp
putative ATPase
2192320-2194353
+
CDS
methionine tRNA synthetase
 
Reported regulatory sites for mrp:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA SP ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.789
2192304-2192319 R
gtcat AGTAGGCATTACTTCT taata
-
0
-
1.789
2192247-2192262 R
aaatg TTAAGTAAGTACTTCT ctata
-
0
-
1.629
2192272-2192293 R
gtgaa AAGGGGTTAGATAGTACCAAAT gggaa
-
0
-
0.424
2192227-2192245 R
ttctc TATATTCTTCAGGTAAACT atcag
-
0
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

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