mscL
 
Information for mscL, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3434155-3435531
+
CDS
transport of potassium
3435661-3436071
+
CDS
mscL
mechanosensitive channel
3436342-3436767
-
CDS
putative transcriptional regulator
 
Reported regulatory sites for mscL:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.550
3435618-3435634
cttaa CATTTGTTAGACTTATG gttgt
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.314
3435567-3435589
ttccc TTTGATTATCAAGGATTAATTAA attca
-
0
-
1.766
3435536-3435557
attaa TAAGGCGTCTAATGACGCCTTA ttatt
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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