nadA
 
Information for nadA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
780800-780875
+
tRNA
Lysine tRNA
781308-782351
+
CDS
nadA
quinolinate synthetase; A protein
782389-783108
+
CDS
required for NMN transport
 
Reported regulatory sites for nadA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA VC ST YP SP EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.885
780882-780904
tgtaa AAAAGCGCCCTAAAGGCGCTTTT ttgct
-
0
-
4.885
781038-781060
tgtaa AAAAGCGCCCTAAAGGCGCTTTT ttgct
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.812
781215-781235
gacta TCTTGTTTAGCATATAAAACA aatta
-
0
-
1.482
780930-780948
agatt CGAACCTGCAGCAGGTTTG agttg
-
0
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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