|
nadA
|
| |
| Information
for nadA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
780800-780875
|
+
|
tRNA
|
|
|
Lysine tRNA
|
|
781308-782351
|
+
|
CDS
|
nadA
|
|
quinolinate synthetase; A protein
|
|
782389-783108
|
+
|
CDS
|
|
|
required for NMN transport
|
|
| |
Reported regulatory
sites for nadA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA VC ST YP SP EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.885
|
780882-780904
|
tgtaa AAAAGCGCCCTAAAGGCGCTTTT ttgct
|
-
|
0
|
-
|
|
|
|
|
4.885
|
781038-781060
|
tgtaa AAAAGCGCCCTAAAGGCGCTTTT ttgct
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.812
|
781215-781235
|
gacta TCTTGTTTAGCATATAAAACA aatta
|
-
|
0
|
-
|
|
|
|
|
1.482
|
780930-780948
|
agatt CGAACCTGCAGCAGGTTTG agttg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|