nadB
 
Information for nadB, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2707457-2708032
-
CDS
RNA polymerase; sigma-E factor; heat shock and oxidative stress
2708440-2710062
+
CDS
nadB
quinolinate synthetase; B protein
2710047-2710904
-
CDS
putative enzyme
 
Reported regulatory sites for nadB:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.689
2708342-2708363
cagcg TGTTTAGCAACTGTAACAAATA ttaaa
-
0
-
2.689
2708416-2708437
aacca TGTTTAGTAAATTAAACAAAGA aaatg
-
0
-
2.183
2708135-2708155
tttgt AAAGTTCCGTAACGCATCTGT ttttg
-
0
-
1.489
2708034-2708051
tcatc CGAGGTAAAGTCTCCCCA aacca
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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