|
nagA
|
| |
| Information
for nagA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
699597-700817
|
-
|
CDS
|
|
|
transcriptional repressor of nag (N-acetylglucosamine) operon
|
|
700826-701974
|
-
|
CDS
|
nagA
|
|
N-acetylglucosamine-6-phosphate deacetylase
|
|
702034-702834
|
-
|
CDS
|
|
|
glucosamine-6-phosphate deaminase
|
|
| |
Reported regulatory
sites for nagA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.065
|
702000-702023 R
|
atccc TGCCCTGGCTCCTTGCTCAGGGCA atatt
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|