nanA
 
Information for nanA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3368719-3370239
-
CDS
sialic acid transporter
3370318-3371211
-
CDS
nanA
N-acetylneuraminate lyase (aldolase); catabolism of sialic acid; not K-12?
3371333-3372124
-
CDS
putative FADA-type transcriptional regulator
 
Reported regulatory sites for nanA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.532
3371311-3371328 R
atgcc ACTTTAGTGAAGCAGATC gcatt
-
0
-
2.532
3371257-3371274 R
taatt GATCTGGTATAACAGGTA taaag
-
0
-
1.014
3371293-3371308 R
atcgc ATTATAAGCTTTCTGT atggg
-
0
-
 
Critical MAP values:
p=0.01
5.40
p=0.05
4.29
p=0.1
3.77
p=0.2
3.19

Click here to go back