|
nanT
|
| |
| Information
for nanT, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3367982-3368671
|
-
|
CDS
|
|
|
putative enzyme
|
|
3368719-3370239
|
-
|
CDS
|
nanT
|
|
sialic acid transporter
|
|
3370318-3371211
|
-
|
CDS
|
|
|
N-acetylneuraminate lyase (aldolase); catabolism of sialic acid; not K-12?
|
|
| |
Reported regulatory
sites for nanT:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
0.000
|
3370283-3370299 R
|
gctcg CCCCTACCGGGTGAGGG gaaat
|
-
|
0
|
-
|
|
-
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.30
|
|
p=0.05
|
6.05
|
|
p=0.1
|
5.26
|
|
p=0.2
|
4.60
|
|
|